Landsepi : Landscape Epidemiology and Evolution
About
Input
Pathosystem
Rust of wheat
Grapevine downy mildew
Banana black sigatoka
Strategy
Mosaic
Mixture
Rotation
Pyramiding
Load
Cultivars and Genes
Landscape
Treatment
Pathogen
Genes
majorGene
APR
QTL
immunity
Add Gene
Cultivars and Genes
crop
nonCrop
Add a cultivar
Landscape structure (field boundaries)
Landscape 1
Landscape 2
Landscape 3
Landscape 4
Landscape 5
Spatial aggregation of croptypes
Highly fragmented
Balanced
Highly aggregated
Active Rotation strategy
Rotation period (years)
Croptypes
Add Croptype
Simulation duration (years)
Time steps per year (days)
Seed (RNG)
Active Cultivars Treatment
Days (step) between treatment
Cultivars to Treat
Treatment efficacy
Initial probability of infection for susceptible cultivar
(Local initial probability of infection for susceptible cultivar should be upper than 0.01)
Inoculum localisation
Global
Local
Off-season survival probability
Infection rate
Reproduction rate (clonal)
Latent period duration
Infectious period duration
Output
Landscape
Video
Tables and Graphics
Epidemiological control (disease severity)
Evolutionary control (resistance durability)
Frequency of pathogen genotypes
Generate the landscape
Run simulation
Stop simulation